Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks

Tomasz Bednarz; Dadong Wang; Neil Burdett; Yulia Arzhaeva; Ryan Lagerstrom; Alex Khassapov; Pascal Vallotton; Piotr Szul; Shiping Chen; Changming Sun; Luke Domanski; Darren Thompson; Timur Gureyev; John A Taylor

doi:10.1007/978-3-319-10984-8_11

Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks

Tomasz Bednarz
, Dadong Wang
, Neil Burdett
, Yulia Arzhaeva
, Ryan Lagerstrom
, Alex Khassapov
, Pascal Vallotton
, Piotr Szul
, Shiping Chen
, Changming Sun
, Luke Domanski
, Darren Thompson
, Timur Gureyev
, John A Taylor

School of Science & Technology

Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research

6 Citations (Scopus)

Abstract

This chapter describes a novel way of carrying out image analysis, reconstruction and processing tasks using cloud based service provided on the Australian National eResearch Collaboration Tools and Resources (NeCTAR) infrastructure. The toolbox allows users free access to a wide range of useful blocks of functionalities (imaging functions) that can be connected together in workflows allowing creation of even more complex algorithms that can be re-run on different data sets, shared with others or additionally adjusted. The functions given are in the area of cellular imaging, advanced X-ray image analysis, computed tomography and 3D medical imaging and visualisation.

Original language	English
Title of host publication	Signal and Image Analysis for Biomedical and Life Sciences
Editors	Changming Sun, Tomasz Bednarz, Tuan D. Pham Pascal Vallotton, Dadong Wang
Place of Publication	Switzerland
Pages	191-205
Edition	1
DOIs	https://doi.org/10.1007/978-3-319-10984-8_11
Publication status	Published - 31 Dec 2015

Publication series

Name	Advances in Experimental Medicine and Biology (AEMB)
Number	823
ISSN (Print)	0065-2598
ISSN (Electronic)	2214-8019

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10.1007/978-3-319-10984-8_11

https://hdl.handle.net/1959.11/71766

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Bednarz, T., Wang, D., Burdett, N., Arzhaeva, Y., Lagerstrom, R., Khassapov, A., Vallotton, P., Szul, P., Chen, S., Sun, C., Domanski, L., Thompson, D., Gureyev, T., & Taylor, J. A. (2015). Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. In C. Sun, T. Bednarz, T. D. P. P. Vallotton, & D. Wang (Eds.), Signal and Image Analysis for Biomedical and Life Sciences (1 ed., pp. 191-205). (Advances in Experimental Medicine and Biology (AEMB); No. 823).. https://doi.org/10.1007/978-3-319-10984-8_11

Bednarz, Tomasz ; Wang, Dadong ; Burdett, Neil et al. / Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. Signal and Image Analysis for Biomedical and Life Sciences. editor / Changming Sun ; Tomasz Bednarz ; Tuan D. Pham Pascal Vallotton ; Dadong Wang. 1. ed. Switzerland, 2015. pp. 191-205 (Advances in Experimental Medicine and Biology (AEMB); 823).

@inbook{fc59f39a2c5e4fdaa53dcec3f246cd4c,

title = "Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks",

abstract = "This chapter describes a novel way of carrying out image analysis, reconstruction and processing tasks using cloud based service provided on the Australian National eResearch Collaboration Tools and Resources (NeCTAR) infrastructure. The toolbox allows users free access to a wide range of useful blocks of functionalities (imaging functions) that can be connected together in workflows allowing creation of even more complex algorithms that can be re-run on different data sets, shared with others or additionally adjusted. The functions given are in the area of cellular imaging, advanced X-ray image analysis, computed tomography and 3D medical imaging and visualisation. ",

author = "Tomasz Bednarz and Dadong Wang and Neil Burdett and Yulia Arzhaeva and Ryan Lagerstrom and Alex Khassapov and Pascal Vallotton and Piotr Szul and Shiping Chen and Changming Sun and Luke Domanski and Darren Thompson and Timur Gureyev and Taylor, \{John A\}",

year = "2015",

month = dec,

day = "31",

doi = "10.1007/978-3-319-10984-8\_11",

language = "English",

isbn = "9783319109831",

series = "Advances in Experimental Medicine and Biology (AEMB)",

number = "823",

pages = "191--205",

editor = "Changming Sun and Tomasz Bednarz and Vallotton, \{Tuan D. Pham Pascal\} and Dadong Wang",

booktitle = "Signal and Image Analysis for Biomedical and Life Sciences",

edition = "1",

}

Bednarz, T, Wang, D, Burdett, N, Arzhaeva, Y, Lagerstrom, R, Khassapov, A, Vallotton, P, Szul, P, Chen, S, Sun, C, Domanski, L, Thompson, D, Gureyev, T & Taylor, JA 2015, Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. in C Sun, T Bednarz, TDPP Vallotton & D Wang (eds), Signal and Image Analysis for Biomedical and Life Sciences. 1 edn, Advances in Experimental Medicine and Biology (AEMB), no. 823, Switzerland, pp. 191-205. https://doi.org/10.1007/978-3-319-10984-8_11

Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. / Bednarz, Tomasz; Wang, Dadong; Burdett, Neil et al.
Signal and Image Analysis for Biomedical and Life Sciences. ed. / Changming Sun; Tomasz Bednarz; Tuan D. Pham Pascal Vallotton; Dadong Wang. 1. ed. Switzerland, 2015. p. 191-205 (Advances in Experimental Medicine and Biology (AEMB); No. 823).

Research output: Chapter in Book/Report/Conference proceeding › Chapter › Research

TY - CHAP

T1 - Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks

AU - Bednarz, Tomasz

AU - Wang, Dadong

AU - Burdett, Neil

AU - Arzhaeva, Yulia

AU - Lagerstrom, Ryan

AU - Khassapov, Alex

AU - Vallotton, Pascal

AU - Szul, Piotr

AU - Chen, Shiping

AU - Sun, Changming

AU - Domanski, Luke

AU - Thompson, Darren

AU - Gureyev, Timur

AU - Taylor, John A

PY - 2015/12/31

Y1 - 2015/12/31

N2 - This chapter describes a novel way of carrying out image analysis, reconstruction and processing tasks using cloud based service provided on the Australian National eResearch Collaboration Tools and Resources (NeCTAR) infrastructure. The toolbox allows users free access to a wide range of useful blocks of functionalities (imaging functions) that can be connected together in workflows allowing creation of even more complex algorithms that can be re-run on different data sets, shared with others or additionally adjusted. The functions given are in the area of cellular imaging, advanced X-ray image analysis, computed tomography and 3D medical imaging and visualisation.

AB - This chapter describes a novel way of carrying out image analysis, reconstruction and processing tasks using cloud based service provided on the Australian National eResearch Collaboration Tools and Resources (NeCTAR) infrastructure. The toolbox allows users free access to a wide range of useful blocks of functionalities (imaging functions) that can be connected together in workflows allowing creation of even more complex algorithms that can be re-run on different data sets, shared with others or additionally adjusted. The functions given are in the area of cellular imaging, advanced X-ray image analysis, computed tomography and 3D medical imaging and visualisation.

UR - https://doi.org/10.1007/978-3-319-10984-8

U2 - 10.1007/978-3-319-10984-8_11

DO - 10.1007/978-3-319-10984-8_11

M3 - Chapter

SN - 9783319109831

SN - 9783319109848

T3 - Advances in Experimental Medicine and Biology (AEMB)

SP - 191

EP - 205

BT - Signal and Image Analysis for Biomedical and Life Sciences

A2 - Sun, Changming

A2 - Bednarz, Tomasz

A2 - Vallotton, Tuan D. Pham Pascal

A2 - Wang, Dadong

CY - Switzerland

ER -

Bednarz T, Wang D, Burdett N, Arzhaeva Y, Lagerstrom R, Khassapov A et al. Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks. In Sun C, Bednarz T, Vallotton TDPP, Wang D, editors, Signal and Image Analysis for Biomedical and Life Sciences. 1 ed. Switzerland. 2015. p. 191-205. (Advances in Experimental Medicine and Biology (AEMB); 823). doi: 10.1007/978-3-319-10984-8_11

Cloud Based Toolbox for Image Analysis, Processing and Reconstruction Tasks

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